One-click Atlas Registration
One-click registration
Automatically identifies brain slices and matches them to the Allen Brain Atlas
PanoBrain / Fully Automatic Brain Slice Analyzer
Simplify Neuroscience Workflows
PanoBrain rapidly scans brain slices to capture high-resolution digital panoramic images, then automatically performs quantitative analysis such as brain-region segmentation, atlas registration, and cell counting. It automates the full workflow from imaging to data processing and reshapes neuroscience research workflows
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Cell Recognition and Counting
Automated quantification
Reduces manual intervention while ensuring data consistency and accuracy, facilitating the extraction of reliable experimental results
Intelligent Scan Path Planning
One image per minute
Automatically identifies ROIs and plans scan paths. A brain slice scan takes less than 1 minute; with a 10X objective and DAPI & GFP dual channels, a single brain slice takes only 40 seconds
High-precision Autofocus
Thick-slice surface imaging
Precisely focuses on the surface of thick brain slices... and keeps focal planes consistent across all channels, generating high-quality multi-channel data
One-click Brain Atlas Registration
Align with standard atlases for efficient exploration of the brain
Rat Brain Atlas
Mouse Brain Atlas
Macaque Brain Atlas
Ferret Brain Atlas
One-click automatic atlas registration, free from tedious work
Comprehensive slice registration for a hassle-free workflow
Tilted Brain Slice
Damaged Brain Slice
Half Brain Slice
Precise positioning with reliable manual adjustments
Side-by-side Standard 2D Atlas
Bregma Positioning
Automated Fluorescence Quantitative Analysis
Automatic Recognition and Statistics
Supports automatic recognition of DAPI, c-Fos, neurons, glial cells, and other signals, with statistics for positive signal count, area, and fluorescence intensity
Personalized Statistical Region Selection
Supports whole-brain, left-right brain, and custom brain-region statistics to meet diverse counting needs
Hierarchical Counting Statistics
Exports results to Excel in a hierarchical format, clearly linking parent and child brain-region data, making complex anatomical statistics easy to interpret
High-performance Slice Scanner
One Image per Minute
Automatically identifies ROIs and plans scan paths, keeping each brain slice scan under 1 minute
99% Uniformity
Uniform illumination coupled with global background correction achieves up to 99% field uniformity, effortlessly yielding high-quality multi-channel fluorescence images
No Channel Crosstalk
Universal fluorescence channel configurations cover common fluorescence imaging applications, with customizable narrow-band excitation and emission filters to eliminate crosstalk anxiety
Low Phototoxicity
Strobe illumination provides millisecond-level high instantaneous power only during camera exposure, reducing phototoxic effects caused by continuous illumination
Simplification Beyond Expectations
Side LED Illumination
Side-mounted scattered LED illumination enables high-contrast visualization of fluorescent samples, eliminating the need for manual marker-pen positioning
Progress Indicator Light
An embedded ring light shows scan status and progress through color and completion state, making experiment progress easy to track
Parameter Templates
Scan parameters, image contrast, analysis regions, and export size settings can be saved as templates for fast reuse
Batch Export
Supports batch export of multi-channel fluorescence images as single-channel pseudo-color or grayscale, and multi-channel overlays. It seamlessly combines flexible image type selection with highly efficient batch processing
Bring PanoBrain Into Your Lab
Move brain slice scanning, atlas registration, and quantitative analysis into a more efficient automated workflow
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